M. Kim, K. Jung, Y. Ko, I. Kim, K. Hwang, J. Jang, J. Shin, and K. Park, The efficacy of dexamethasone in hypoxia. In Preparation
J. Seo, H. Jung, and Y. Ko, PRID: Prediction model using RWR for interactions between drugs , Submitted
J. Kim,J. Lee, Y. Ko, and James G. Krueger, Multi-omics segregate different transcriptomic impacts, Submitted
M. Lee, Y. Ko, S. Kang, Impaired insulin secretion via Wnt5a/β-catenin signaling induces diabetes in pancreatic cancer patients: Insights from a prospective cohort study, Submitted .
M. Shim, J. Lee, D. Kwon, D. Lee, N. Park, Y. Ko and J. Kim Reference-based read clustering improves the de novo genome assembly of microbial strains, Computational and Structural Biotechnology Journal, 2022 Dec;21:444-451Volum
S. Yoon, Y. Ko, G. Jeong, K. Lee, J. Lee, M. Solmi, L. Jacob, L. Smith, A. Stickley, A. Carvalho, E. Dragioti, A. Kronbichler, A. Koyanagi, S. Hong, T. Thompson, H. Oh, G. Pabo, J. Radua, J. Shin Differential Expression of MicroRNAs in Alzheimer's Disease: A Systematic Review and Meta-analysis, Molecular Psychiatry, 2022 Apr;27:2405-2413
E. Choi, Y.Ko and M Williams Transcriptional analysis of sweet corn hybrids in response to crowding stress, PLoS ONE, 2021. Jun 16(6).
Y. Ko, J. Lee, C. Lee, N. Jeon, K. Lee, J. Oh, A. Kronbichler, M. Saleem, B. Lim, and J. Shin The effect of interleukin-4 and dexamethasone on RNA-Seq-based transcriptomic profiling of human podocytes: A potential role in minimal change nephrotic syndrome, J Clin Med 2021 Feb;10(3):496.
J. Oh, J. Shin, C. Lee, H.Lee, Y. Ko and J. Lee Clinical application of a phenotype-based NGS panel for differential diagnosis of inherited kidney disease and the beyond, Clinical Genetics, 2021 Feb;99(2):236-249.
J. Lee, M. Son, C. Son, K. Lee, Y. Ko, J. Radua, M. Eisenhut, F. Gressier, A. Koyanagi, B. Stubbs, M. Solmi, T. Rais, K. Lee, A. Kronbichler, E. Dragioti, D. Vasconcelos, F. Silva, K. Tizaoui, G. Jeong, J. Kim, A. Brunoni, A. Carvalho, J. Shin, P. Fusar-Poli Genetic variation and autism: A field synopsis and systematic meta-analysis, Brain Science, 10(10):692, 2020
Y. Ko Computational drug repositioning: Current progress and challenges, Applied Sciences, 10(15):5076, 2020
S. Name, K. Lee, Y. Ko, M. Eisenhut, K. Lee, J. Shin, A. Kronbichler Understanding the genetics in systematic lupus erythematosus using Bayesian statistics and gene network analysis, Clincial Exp. Pediatric, Published Online, July 15, 2020
J. Jeong, M. Kim, J. Lee, H. Lee, Y. Ko, H. Kim, S. Fang ID1-mediated BMP signaling pathway potentiates Glucagon-like peptide-1 secretion in response to nutrient replenishment, International Journal of Molecular Sciences, 21(11):3824, 2020
M. Kim, K. Jung, Y. Ko, I. Kim, K. Hwang, J. Jang, J. Shin, and K. Park TNF-α pretreatment improves the survival and function of transplanted human neural progenitor cells following hypoxic-ischemic brain injury, Cells, 9(5):1195, 2020
J. Park, K. Lee, B. Jeon, H. Ochs, J. Lee, H. Gee, S. Seo, D, Geum, C. Piccirillo, M. Eisenhut, H. Vliet, J. Lee, A. Kronbichler, Y. Ko, J. Shin Immune dysregulation, polyendocrinopathy, enteropathy, X-linked (IPEX) syndrome: a systematic review. Autoimmun Rev. Vol 19, Issue 6, 2020
Y. Ko, C. Lee, Y. Lee and J. Lee Systematic Approach for Drug Repositioning of Anti-epileptic Drugs., Diagnostics, 9(4), 208, 2019
S. Baek, S. Oh, D. Kim, K. Kim. K. Boo, Y. Ko, D. Park and S. Fang RORα Is Crucial for Attenuated Inflammatory Response to Maintain Intestinal Homeostasis.PNAS, 2019
S. Jang, S. Fang, K. Kim, Y. Ko, H. Kim. J. Oh, G. Hong, S. Lee, J. Kim, I. Noh and D. Lee Combination treatment with n-3 polyunsaturated fatty acids and ursodeoxycholic acid dissolves cholesterol gallstones in mice. Scientific Reports 9, Article number:12740, 2019
K. Lee, A. Kronbichler, D. Vasconcelos, F. Silva, Y. Ko, Y. Oh, M. Eisenhut, J. Shin Genetic Variants in Antineutrophil Cytoplasmic Antibody-Associated Vasculitis: A Bayesian Approach and Systematic Review, Journal of Clinical Medicine, 2019
Y. Ko, J. Kim, and S. Zas Markov chain Monte Carlo simulation of a bayesian mixture model for gene network inference., Genes & Genomics, 2019
J. Lee, D. Lee, M. Sim, D. Kwon, J. Kim, Y. Ko, and J. Kim mySyntenyPortal: an application package to construct websites for synteny block analysis.,BMC Bioinformatics,19:216, 2018
M. Kim, K. Jung, I. Kim, I. Lee, Y. Ko, J. Shin and K. Park TNF-α induces human neural progenitor cell survival after oxygen-glucose deprivation via NF-κB pathway. Experimental & Molecular Medicine, 50:14, 2018
Y. Cho, C. Lee, E. Jeong, M. Kim, J. Hong, Y. Ko, B. Lee, G. Yun, B. Kim, J. Jung, J. Jung and J. Lee Prevalence of Rare Genetic Variations and Their Implications in NGS-data Interpretation. Scientific Reports 7, Article number:9801, 2017
Y. Ko, C.Lee, H.Lee, M.Lee and J. Lee Clinical application of next-generation sequencing for the diagnosis of segmental neurofibromatosis. Journal of Dermatological Science, 2017
Y. Ko, M. Cho, J.Lee, and J. Kim Identification of disease comorbidity through hidden molecular mechanisms. Scientific Reports 6, Article number:39433, 2016
D. Lee, M. Cho, W. Hong, D. Lim, H. Kim, Y. Cho, J. Jeong, B. Choi, Y. Ko, and J. Kim Evolutionary analyses of Hanwoo (Korean cattle)-specific single-nucleotide polymorphisms and genes using whole-genome resequencing data of a Hanwoo population., Mol. Cells 2016; 39(9): 692~698, 2016
J. Lee, W. Hong, M. Cho, M. Sim, D. Lee, Y. Ko , and J. Kim Synteny Portal: a web-based application portal for synteny block analysis. Nucleic Acids Research , doi: 10.1093/nar/gkw310, First published online: May 6, 2016
Y. Ko, C. Lee, M. Moon, G. Hong, C. Cheon, and J. Lee Unravelling the mechanism of action of enzyme replacement therapy in Fabry disease. Journal of Human Genetics, 61:143-149, 2016
H. Han, H. Shim, D. Shin, J. Shim, Y. Ko, J. Shin, H. Kim, A. Cho, E. Kim, T. Lee, H. Kim, S. Yang, D. Bae, A Yun, S. Kim, C. Kim, H. Cho, B. Kang, S. Shin, and I. Lee TRRUST: a reference database of human transcriptional regulatory interactions. Scientific Reports, 12:11432, 2015